Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 AC009078.2-202ENST00000463353 338 ntBASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 RNPS1P1-201ENST00000507437 918 ntBASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 AC064862.7-201ENST00000604520 867 ntBASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 RPS2P1-201ENST00000434010 821 ntBASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 AL662844.1-201ENST00000546340 181 ntBASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 AC148477.8-201ENST00000624298 468 ntBASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYSMD3Q7Z3D4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 SLC25A1P3-201ENST00000395415 828 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 LINC00982-205ENST00000420957 435 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 KRT18P67-201ENST00000432816 1264 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AC018712.1-201ENST00000455767 687 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AF186996.4-201ENST00000467186 377 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AC108860.2-201ENST00000562760 2183 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms