Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AC107890.1-201ENST00000422478 521 ntBASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 CRB3P1-201ENST00000449338 276 ntBASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
OTOP1Q7RTM1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AL355306.1-201ENST00000415580 579 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 SLC25A39P2-201ENST00000537614 270 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 FO538757.1-201ENST00000623083 1397 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AC097637.2-201ENST00000624096 1997 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AC012317.2-201ENST00000623305 2251 ntBASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
OTOP1Q7RTM1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 AC002056.1-201ENST00000395613 760 ntBASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 AP001059.3-201ENST00000619053 235 ntBASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 AL358472.5-202ENST00000641448 1267 ntBASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
OTOP1Q7RTM1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.88■□□□□ 0.77
OTOP1Q7RTM1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms