Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AL138831.2-201ENST00000606564 490 ntBASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AL139327.4-201ENST00000612362 153 ntBASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AC046185.3-201ENST00000623228 1824 ntBASIC15.75■□□□□ 0.11
NIPAL3Q6P499 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AC010460.3-201ENST00000511359 1579 ntBASIC15.75■□□□□ 0.11
NIPAL3Q6P499 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NSUN5P1-202ENST00000421140 1535 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NSUN5P2-203ENST00000457352 1529 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 PCDHA14-201ENST00000506751 2298 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AC097374.2-201ENST00000618617 1306 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AC005915.1-201ENST00000624912 2018 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AC007967.3-201ENST00000434308 558 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AC012615.1-201ENST00000565797 1299 ntBASIC15.74■□□□□ 0.11
NIPAL3Q6P499 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL3Q6P499 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 AC096582.2-201ENST00000510860 516 ntBASIC15.73■□□□□ 0.11
NIPAL3Q6P499 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 AC009533.2-201ENST00000543664 586 ntBASIC15.73■□□□□ 0.11
NIPAL3Q6P499 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms