Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 RASA4DP-201ENST00000460726 1199 ntBASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AL157888.1-201ENST00000631930 593 ntBASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AL024508.2-201ENST00000607749 1894 ntBASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AC016396.2-201ENST00000562575 1417 ntBASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP4R4Q6NUP7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 SEC1P-202ENST00000473944 940 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC010240.3-201ENST00000607688 395 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC008741.2-201ENST00000612792 3115 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 LINC01311-201ENST00000565162 1445 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 AC132938.6-201ENST00000623828 1655 ntBASIC16.59■□□□□ 0.25
PPP4R4Q6NUP7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP4R4Q6NUP7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPP4R4Q6NUP7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms