Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 DUTP2-201ENST00000519164 463 ntBASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AL138966.2-201ENST00000621997 464 ntBASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF220Q5VTB9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SLC25A3P1-201ENST00000443844 931 ntBASIC16.68■□□□□ 0.26
RNF220Q5VTB9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.68■□□□□ 0.26
RNF220Q5VTB9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 AL157888.1-201ENST00000631930 593 ntBASIC16.68■□□□□ 0.26
RNF220Q5VTB9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 AC133963.1-201ENST00000504166 1679 ntBASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF220Q5VTB9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms