Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARS2Q5ST30 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 AC129492.6-201ENST00000611383 1305 ntBASIC18.23■□□□□ 0.51
VARS2Q5ST30 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.23■□□□□ 0.51
VARS2Q5ST30 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 FAM58CP-201ENST00000435741 640 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 CEND1P1-201ENST00000451006 455 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 AL513480.1-201ENST00000451731 511 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 AL031432.2-201ENST00000566714 459 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 AL928711.1-201ENST00000570165 459 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 AC092364.2-202ENST00000597012 1073 ntBASIC18.22■□□□□ 0.51
VARS2Q5ST30 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARS2Q5ST30 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.22■□□□□ 0.51
VARS2Q5ST30 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 AC254562.1-201ENST00000417586 456 ntBASIC18.21■□□□□ 0.51
VARS2Q5ST30 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 SNHG9-202ENST00000564014 471 ntBASIC18.21■□□□□ 0.51
VARS2Q5ST30 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 AC026790.2-201ENST00000606282 430 ntBASIC18.21■□□□□ 0.51
VARS2Q5ST30 AC091812.2-201ENST00000619081 385 ntBASIC18.21■□□□□ 0.51
VARS2Q5ST30 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VARS2Q5ST30 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VARS2Q5ST30 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
VARS2Q5ST30 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 AC007613.1-201ENST00000572811 2597 ntBASIC18.2■□□□□ 0.5
VARS2Q5ST30 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 HCG11-201ENST00000411553 5696 ntBASIC18.2■□□□□ 0.5
VARS2Q5ST30 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 METTL21AP1-201ENST00000438852 635 ntBASIC18.2■□□□□ 0.5
VARS2Q5ST30 CYMP-203ENST00000474680 1263 ntBASIC18.2■□□□□ 0.5
VARS2Q5ST30 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 AC068137.2-201ENST00000605408 478 ntBASIC18.2■□□□□ 0.5
VARS2Q5ST30 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms