Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC015936.2-201ENST00000593177 259 ntBASIC14.81□□□□□ -0.04
LRRK2Q5S007 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 MIR6727-201ENST00000620702 65 ntBASIC14.8□□□□□ -0.04
LRRK2Q5S007 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRK2Q5S007 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRK2Q5S007 AC007431.3-201ENST00000623221 587 ntBASIC14.8□□□□□ -0.04
LRRK2Q5S007 AC004840.1-201ENST00000636359 365 ntBASIC14.8□□□□□ -0.04
LRRK2Q5S007 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC087499.5-201ENST00000452760 1342 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC002558.1-201ENST00000488906 803 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 DUTP2-201ENST00000519164 463 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC104989.1-201ENST00000519711 778 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 WASH4P-201ENST00000564273 1246 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC103810.3-201ENST00000583567 96 ntBASIC14.79□□□□□ -0.04
LRRK2Q5S007 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRK2Q5S007 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 AC020763.4-201ENST00000623414 4170 ntBASIC14.78□□□□□ -0.04
LRRK2Q5S007 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 AL353705.2-201ENST00000428243 662 ntBASIC14.78□□□□□ -0.04
LRRK2Q5S007 MYCLP2-201ENST00000449268 967 ntBASIC14.78□□□□□ -0.04
LRRK2Q5S007 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRK2Q5S007 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRK2Q5S007 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms