Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 AC078925.2-201ENST00000624013 1973 ntBASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 KRT18P56-201ENST00000507275 550 ntBASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 AL139288.1-201ENST00000623748 933 ntBASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO1Q2MKA7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AP002414.1-201ENST00000391405 1147 ntBASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AC008608.2-201ENST00000606089 416 ntBASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 PCDHB17P-201ENST00000539533 2393 ntBASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO1Q2MKA7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RSPO1Q2MKA7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms