Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
NKX6-1P78426 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NKX6-1P78426 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX6-1P78426 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX6-1P78426 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.27■□□□□ 0.03
NKX6-1P78426 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NKX6-1P78426 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX6-1P78426 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NKX6-1P78426 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 AC124067.4-201ENST00000519691 2379 ntBASIC15.26■□□□□ 0.03
NKX6-1P78426 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NKX6-1P78426 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 DDX43P3-201ENST00000441064 443 ntBASIC15.26■□□□□ 0.03
NKX6-1P78426 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX6-1P78426 AC004967.1-201ENST00000453589 447 ntBASIC15.26■□□□□ 0.03
NKX6-1P78426 RNA5SP415-201ENST00000517246 115 ntBASIC15.26■□□□□ 0.03
NKX6-1P78426 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX6-1P78426 SART3-203ENST00000546611 1184 ntBASIC15.26■□□□□ 0.03
NKX6-1P78426 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NKX6-1P78426 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.26■□□□□ 0.03
NKX6-1P78426 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX6-1P78426 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
NKX6-1P78426 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NKX6-1P78426 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
NKX6-1P78426 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.25■□□□□ 0.03
NKX6-1P78426 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.25■□□□□ 0.03
NKX6-1P78426 ABCD1P5-201ENST00000445663 754 ntBASIC15.25■□□□□ 0.03
NKX6-1P78426 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.25■□□□□ 0.03
NKX6-1P78426 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 RNA5SP416-201ENST00000516838 111 ntBASIC15.25■□□□□ 0.03
NKX6-1P78426 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.25■□□□□ 0.03
NKX6-1P78426 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NKX6-1P78426 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
NKX6-1P78426 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NKX6-1P78426 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NKX6-1P78426 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX6-1P78426 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX6-1P78426 AL356309.3-201ENST00000624132 1934 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms