Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.07■□□□□ 0.8
IRX3P78415 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.07■□□□□ 0.8
IRX3P78415 ACTG1P4-201ENST00000425123 1122 ntBASIC20.07■□□□□ 0.8
IRX3P78415 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.07■□□□□ 0.8
IRX3P78415 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.07■□□□□ 0.8
IRX3P78415 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.07■□□□□ 0.8
IRX3P78415 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.07■□□□□ 0.8
IRX3P78415 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.07■□□□□ 0.8
IRX3P78415 AC093028.1-201ENST00000622998 982 ntBASIC20.07■□□□□ 0.8
IRX3P78415 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
IRX3P78415 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.07■□□□□ 0.8
IRX3P78415 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
IRX3P78415 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX3P78415 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
IRX3P78415 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
IRX3P78415 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 AC124067.4-201ENST00000519691 2379 ntBASIC20.06■□□□□ 0.8
IRX3P78415 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
IRX3P78415 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.06■□□□□ 0.8
IRX3P78415 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.06■□□□□ 0.8
IRX3P78415 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 AC068137.2-201ENST00000605408 478 ntBASIC20.06■□□□□ 0.8
IRX3P78415 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX3P78415 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
IRX3P78415 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IRX3P78415 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX3P78415 AC141586.5-201ENST00000624546 2050 ntBASIC20.06■□□□□ 0.8
IRX3P78415 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX3P78415 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
IRX3P78415 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
IRX3P78415 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 MIR770-201ENST00000390219 98 ntBASIC20.05■□□□□ 0.8
IRX3P78415 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
IRX3P78415 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.05■□□□□ 0.8
IRX3P78415 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.05■□□□□ 0.8
IRX3P78415 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.05■□□□□ 0.8
IRX3P78415 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.05■□□□□ 0.8
IRX3P78415 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 AC004835.2-201ENST00000603762 682 ntBASIC20.05■□□□□ 0.8
IRX3P78415 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX3P78415 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX3P78415 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX3P78415 AL590787.1-201ENST00000568856 1315 ntBASIC20.04■□□□□ 0.8
IRX3P78415 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
IRX3P78415 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
IRX3P78415 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IRX3P78415 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.04■□□□□ 0.8
IRX3P78415 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IRX3P78415 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX3P78415 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.04■□□□□ 0.8
IRX3P78415 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IRX3P78415 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX3P78415 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms