Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.01■□□□□ 0.47
IRX4P78413 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IRX4P78413 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18■□□□□ 0.47
IRX4P78413 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
IRX4P78413 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 AC124067.4-201ENST00000519691 2379 ntBASIC18■□□□□ 0.47
IRX4P78413 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IRX4P78413 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18■□□□□ 0.47
IRX4P78413 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18■□□□□ 0.47
IRX4P78413 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18■□□□□ 0.47
IRX4P78413 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18■□□□□ 0.47
IRX4P78413 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18■□□□□ 0.47
IRX4P78413 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18■□□□□ 0.47
IRX4P78413 AL139424.1-201ENST00000607572 797 ntBASIC18■□□□□ 0.47
IRX4P78413 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18■□□□□ 0.47
IRX4P78413 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
IRX4P78413 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18■□□□□ 0.47
IRX4P78413 TP73-AS1-210ENST00000637775 1455 ntBASIC18■□□□□ 0.47
IRX4P78413 PKD1P5-201ENST00000532415 10291 ntBASIC18■□□□□ 0.47
IRX4P78413 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
IRX4P78413 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18■□□□□ 0.47
IRX4P78413 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IRX4P78413 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
IRX4P78413 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
IRX4P78413 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.99■□□□□ 0.47
IRX4P78413 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
IRX4P78413 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.99■□□□□ 0.47
IRX4P78413 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.99■□□□□ 0.47
IRX4P78413 HMGN1P19-201ENST00000436976 333 ntBASIC17.99■□□□□ 0.47
IRX4P78413 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.99■□□□□ 0.47
IRX4P78413 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.99■□□□□ 0.47
IRX4P78413 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
IRX4P78413 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
IRX4P78413 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
IRX4P78413 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
IRX4P78413 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IRX4P78413 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.99■□□□□ 0.47
IRX4P78413 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.98■□□□□ 0.47
IRX4P78413 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 KRT18P55-202ENST00000578578 1546 ntBASIC17.98■□□□□ 0.47
IRX4P78413 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
IRX4P78413 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 RBM17P3-201ENST00000417687 1192 ntBASIC17.98■□□□□ 0.47
IRX4P78413 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.98■□□□□ 0.47
IRX4P78413 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.98■□□□□ 0.47
IRX4P78413 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.98■□□□□ 0.47
IRX4P78413 AC145285.3-201ENST00000564603 959 ntBASIC17.98■□□□□ 0.47
IRX4P78413 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IRX4P78413 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.98■□□□□ 0.47
IRX4P78413 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms