Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP1P78357 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 SPTLC1P1-201ENST00000447199 261 ntBASIC20.37■□□□□ 0.85
CNTNAP1P78357 GIMAP3P-201ENST00000495150 836 ntBASIC20.37■□□□□ 0.85
CNTNAP1P78357 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP1P78357 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP1P78357 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP1P78357 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP1P78357 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP1P78357 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 SPCS2P4-201ENST00000436160 681 ntBASIC20.36■□□□□ 0.85
CNTNAP1P78357 ACA64.2-201ENST00000459014 129 ntBASIC20.36■□□□□ 0.85
CNTNAP1P78357 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 MIR6805-201ENST00000615055 62 ntBASIC20.36■□□□□ 0.85
CNTNAP1P78357 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP1P78357 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP1P78357 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP1P78357 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 AC079776.1-201ENST00000401540 1152 ntBASIC20.35■□□□□ 0.85
CNTNAP1P78357 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 MIR6080-201ENST00000617359 66 ntBASIC20.35■□□□□ 0.85
CNTNAP1P78357 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP1P78357 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP1P78357 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP1P78357 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CNTNAP1P78357 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP1P78357 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 AC004945.1-201ENST00000416738 983 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 LINC01451-201ENST00000623792 534 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 AKAP8P1-201ENST00000434743 1349 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 LINC00304-203ENST00000565008 1864 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP1P78357 RARRES2P8-201ENST00000566335 367 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 TP53TG3HP-202ENST00000569755 579 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 MIR4525-201ENST00000580000 75 ntBASIC20.34■□□□□ 0.85
CNTNAP1P78357 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP1P78357 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP1P78357 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
CNTNAP1P78357 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP1P78357 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP1P78357 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP1P78357 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms