Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PRYP5-201ENST00000451909 266 ntBASIC15.1■□□□□ 0.01
HIST1H3AP68431 AC106795.1-205ENST00000512851 1056 ntBASIC15.1■□□□□ 0.01
HIST1H3AP68431 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 AP001269.4-201ENST00000609611 512 ntBASIC15.1■□□□□ 0.01
HIST1H3AP68431 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HIST1H3AP68431 AC009053.2-201ENST00000563701 2365 ntBASIC15.1■□□□□ 0.01
HIST1H3AP68431 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H3AP68431 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 GPR89P-201ENST00000407924 1495 ntBASIC15.09■□□□□ 0.01
HIST1H3AP68431 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 FOSL1P1-201ENST00000511041 816 ntBASIC15.09■□□□□ 0.01
HIST1H3AP68431 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 MIR3652-201ENST00000579335 131 ntBASIC15.09■□□□□ 0.01
HIST1H3AP68431 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 AC004817.3-201ENST00000602957 2129 ntBASIC15.09■□□□□ 0.01
HIST1H3AP68431 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H3AP68431 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H3AP68431 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.08■□□□□ 0.01
HIST1H3AP68431 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
HIST1H3AP68431 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.08■□□□□ 0.01
HIST1H3AP68431 FRMD8P1-201ENST00000440433 1524 ntBASIC15.08■□□□□ 0.01
HIST1H3AP68431 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H3AP68431 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 RBM17P3-201ENST00000417687 1192 ntBASIC15.08■□□□□ 0
HIST1H3AP68431 HCG4P8-203ENST00000443049 980 ntBASIC15.08■□□□□ 0
HIST1H3AP68431 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.08■□□□□ 0
HIST1H3AP68431 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.08■□□□□ 0
HIST1H3AP68431 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.08■□□□□ 0
HIST1H3AP68431 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.08■□□□□ 0
HIST1H3AP68431 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST1H3AP68431 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HIST1H3AP68431 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HIST1H3AP68431 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms