Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.1□□□□□ -0.15
LMO4P61968 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LMO4P61968 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LMO4P61968 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO4P61968 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.1□□□□□ -0.15
LMO4P61968 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.1□□□□□ -0.15
LMO4P61968 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.1□□□□□ -0.15
LMO4P61968 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LMO4P61968 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO4P61968 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO4P61968 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO4P61968 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO4P61968 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO4P61968 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LMO4P61968 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LMO4P61968 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 ADH5P3-201ENST00000433842 1137 ntBASIC14.09□□□□□ -0.15
LMO4P61968 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO4P61968 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.09□□□□□ -0.15
LMO4P61968 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
LMO4P61968 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.09□□□□□ -0.15
LMO4P61968 AC005412.3-201ENST00000580309 715 ntBASIC14.09□□□□□ -0.15
LMO4P61968 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 AC004835.2-201ENST00000603762 682 ntBASIC14.09□□□□□ -0.15
LMO4P61968 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO4P61968 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
LMO4P61968 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LMO4P61968 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO4P61968 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 EGFEM1P-202ENST00000431685 1563 ntBASIC14.09□□□□□ -0.15
LMO4P61968 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO4P61968 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO4P61968 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.08□□□□□ -0.15
LMO4P61968 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LMO4P61968 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.08□□□□□ -0.15
LMO4P61968 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LMO4P61968 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO4P61968 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LMO4P61968 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LMO4P61968 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 AL645939.2-201ENST00000427340 991 ntBASIC14.08□□□□□ -0.16
LMO4P61968 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.08□□□□□ -0.16
LMO4P61968 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO4P61968 RFPL4AP1-201ENST00000530883 850 ntBASIC14.08□□□□□ -0.16
LMO4P61968 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LMO4P61968 AC022145.2-201ENST00000598203 171 ntBASIC14.08□□□□□ -0.16
LMO4P61968 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO4P61968 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO4P61968 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
LMO4P61968 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms