Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PAX9P55771 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.88□□□□□ -0.19
PAX9P55771 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX9P55771 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 MYCLP1-201ENST00000372451 1075 ntBASIC13.88□□□□□ -0.19
PAX9P55771 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 SNORA78-201ENST00000459373 127 ntBASIC13.88□□□□□ -0.19
PAX9P55771 AC068472.1-201ENST00000474589 881 ntBASIC13.88□□□□□ -0.19
PAX9P55771 AC128688.1-201ENST00000487626 519 ntBASIC13.88□□□□□ -0.19
PAX9P55771 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PAX9P55771 MIR4497-201ENST00000583208 89 ntBASIC13.88□□□□□ -0.19
PAX9P55771 AC019129.2-201ENST00000609837 1235 ntBASIC13.88□□□□□ -0.19
PAX9P55771 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX9P55771 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX9P55771 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX9P55771 AL391807.1-203ENST00000604392 2365 ntBASIC13.88□□□□□ -0.19
PAX9P55771 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX9P55771 AC097374.2-201ENST00000618617 1306 ntBASIC13.88□□□□□ -0.19
PAX9P55771 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX9P55771 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PAX9P55771 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PAX9P55771 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PAX9P55771 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PAX9P55771 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.87□□□□□ -0.19
PAX9P55771 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.87□□□□□ -0.19
PAX9P55771 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PAX9P55771 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.87□□□□□ -0.19
PAX9P55771 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PAX9P55771 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.87□□□□□ -0.19
PAX9P55771 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PAX9P55771 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PAX9P55771 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PAX9P55771 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms