Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH8P55286 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH8P55286 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH8P55286 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 AL590627.1-203ENST00000421194 1026 ntBASIC18.41■□□□□ 0.54
CDH8P55286 AC136632.2-201ENST00000512891 861 ntBASIC18.41■□□□□ 0.54
CDH8P55286 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH8P55286 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH8P55286 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH8P55286 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH8P55286 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.41■□□□□ 0.54
CDH8P55286 AC117500.6-201ENST00000624871 588 ntBASIC18.41■□□□□ 0.54
CDH8P55286 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
CDH8P55286 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH8P55286 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 IL9RP2-201ENST00000423948 1312 ntBASIC18.41■□□□□ 0.54
CDH8P55286 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH8P55286 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH8P55286 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH8P55286 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH8P55286 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH8P55286 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH8P55286 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH8P55286 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH8P55286 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CDH8P55286 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH8P55286 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH8P55286 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH8P55286 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 GPR89P-201ENST00000407924 1495 ntBASIC18.39■□□□□ 0.54
CDH8P55286 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH8P55286 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH8P55286 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH8P55286 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH8P55286 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDH8P55286 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH8P55286 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 IGHV3-22-201ENST00000520721 359 ntBASIC18.39■□□□□ 0.53
CDH8P55286 SLC25A1P1-201ENST00000528351 927 ntBASIC18.39■□□□□ 0.53
CDH8P55286 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH8P55286 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDH8P55286 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms