Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NR1H2P55055 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.43■□□□□ 0.22
NR1H2P55055 AL671277.2-201ENST00000458060 996 ntBASIC16.43■□□□□ 0.22
NR1H2P55055 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.43■□□□□ 0.22
NR1H2P55055 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.43■□□□□ 0.22
NR1H2P55055 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H2P55055 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 AC005915.1-201ENST00000624912 2018 ntBASIC16.43■□□□□ 0.22
NR1H2P55055 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H2P55055 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
NR1H2P55055 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H2P55055 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H2P55055 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 AC009947.2-201ENST00000444014 672 ntBASIC16.42■□□□□ 0.22
NR1H2P55055 AL359075.1-203ENST00000462729 1002 ntBASIC16.42■□□□□ 0.22
NR1H2P55055 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.42■□□□□ 0.22
NR1H2P55055 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 AL441883.1-201ENST00000566170 1045 ntBASIC16.42■□□□□ 0.22
NR1H2P55055 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.42■□□□□ 0.22
NR1H2P55055 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
NR1H2P55055 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NR1H2P55055 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NR1H2P55055 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H2P55055 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NR1H2P55055 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.41■□□□□ 0.22
NR1H2P55055 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.41■□□□□ 0.22
NR1H2P55055 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.41■□□□□ 0.22
NR1H2P55055 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H2P55055 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.41■□□□□ 0.22
NR1H2P55055 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H2P55055 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H2P55055 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H2P55055 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms