Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LIMK2P53671 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 AL118508.1-201ENST00000613502 2345 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.42■□□□□ 0.38
LIMK2P53671 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LIMK2P53671 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 MRPL3P1-201ENST00000400109 1033 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.42■□□□□ 0.38
LIMK2P53671 AP000347.1-202ENST00000435868 847 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.42■□□□□ 0.38
LIMK2P53671 AF238378.1-201ENST00000526806 358 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.42■□□□□ 0.38
LIMK2P53671 AL591684.3-201ENST00000605187 298 ntBASIC17.42■□□□□ 0.38
LIMK2P53671 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LIMK2P53671 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.42■□□□□ 0.38
LIMK2P53671 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LIMK2P53671 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIMK2P53671 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LIMK2P53671 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.41■□□□□ 0.38
LIMK2P53671 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.41■□□□□ 0.38
LIMK2P53671 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.41■□□□□ 0.38
LIMK2P53671 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.41■□□□□ 0.38
LIMK2P53671 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.41■□□□□ 0.38
LIMK2P53671 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.41■□□□□ 0.38
LIMK2P53671 AC096582.2-201ENST00000510860 516 ntBASIC17.41■□□□□ 0.38
LIMK2P53671 IGHV3-52-201ENST00000519770 353 ntBASIC17.41■□□□□ 0.38
LIMK2P53671 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
LIMK2P53671 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.41■□□□□ 0.38
LIMK2P53671 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.41■□□□□ 0.38
LIMK2P53671 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LIMK2P53671 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIMK2P53671 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.4■□□□□ 0.38
LIMK2P53671 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.4■□□□□ 0.38
LIMK2P53671 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.4■□□□□ 0.38
LIMK2P53671 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms