Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.79■□□□□ 0.28
PDX1P52945 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
PDX1P52945 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDX1P52945 AC012317.2-201ENST00000623305 2251 ntBASIC16.79■□□□□ 0.28
PDX1P52945 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 KRT18P28-201ENST00000453838 1332 ntBASIC16.78■□□□□ 0.28
PDX1P52945 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.78■□□□□ 0.28
PDX1P52945 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.78■□□□□ 0.28
PDX1P52945 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PDX1P52945 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.78■□□□□ 0.28
PDX1P52945 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.78■□□□□ 0.28
PDX1P52945 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.78■□□□□ 0.28
PDX1P52945 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.78■□□□□ 0.28
PDX1P52945 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDX1P52945 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDX1P52945 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.78■□□□□ 0.28
PDX1P52945 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDX1P52945 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDX1P52945 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDX1P52945 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.77■□□□□ 0.28
PDX1P52945 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
PDX1P52945 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.77■□□□□ 0.28
PDX1P52945 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDX1P52945 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
PDX1P52945 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.77■□□□□ 0.28
PDX1P52945 HTR5BP-201ENST00000430851 1154 ntBASIC16.77■□□□□ 0.28
PDX1P52945 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.77■□□□□ 0.28
PDX1P52945 SIGLEC30P-201ENST00000455569 941 ntBASIC16.77■□□□□ 0.28
PDX1P52945 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.77■□□□□ 0.28
PDX1P52945 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDX1P52945 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDX1P52945 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.77■□□□□ 0.28
PDX1P52945 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.77■□□□□ 0.28
PDX1P52945 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.77■□□□□ 0.28
PDX1P52945 AL078644.1-201ENST00000609881 752 ntBASIC16.77■□□□□ 0.28
PDX1P52945 AL805961.1-202ENST00000641562 540 ntBASIC16.77■□□□□ 0.28
PDX1P52945 GPR89P-201ENST00000407924 1495 ntBASIC16.77■□□□□ 0.28
PDX1P52945 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PDX1P52945 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PDX1P52945 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
PDX1P52945 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDX1P52945 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 KRT18P55-202ENST00000578578 1546 ntBASIC16.76■□□□□ 0.27
PDX1P52945 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
PDX1P52945 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PDX1P52945 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.76■□□□□ 0.27
PDX1P52945 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PDX1P52945 AC109462.3-201ENST00000573934 613 ntBASIC16.76■□□□□ 0.27
PDX1P52945 STK25P1-201ENST00000585406 838 ntBASIC16.76■□□□□ 0.27
PDX1P52945 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 LINC02084-201ENST00000606069 1096 ntBASIC16.76■□□□□ 0.27
PDX1P52945 C20orf181-201ENST00000623918 480 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms