Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.29■□□□□ 0.2
CLK1P49759 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.29■□□□□ 0.2
CLK1P49759 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.29■□□□□ 0.2
CLK1P49759 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.29■□□□□ 0.2
CLK1P49759 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLK1P49759 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLK1P49759 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CLK1P49759 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLK1P49759 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLK1P49759 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLK1P49759 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
CLK1P49759 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CLK1P49759 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLK1P49759 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 AL645929.1-201ENST00000420084 975 ntBASIC16.28■□□□□ 0.2
CLK1P49759 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 SPDYE13P-201ENST00000445314 798 ntBASIC16.28■□□□□ 0.2
CLK1P49759 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 VENTXP5-201ENST00000523979 775 ntBASIC16.28■□□□□ 0.2
CLK1P49759 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
CLK1P49759 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 AC009154.2-201ENST00000621177 724 ntBASIC16.28■□□□□ 0.2
CLK1P49759 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.28■□□□□ 0.2
CLK1P49759 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.28■□□□□ 0.2
CLK1P49759 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLK1P49759 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
CLK1P49759 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.28■□□□□ 0.2
CLK1P49759 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLK1P49759 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 AL353692.3-201ENST00000407031 1396 ntBASIC16.27■□□□□ 0.2
CLK1P49759 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLK1P49759 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 MST1L-201ENST00000442552 2185 ntBASIC16.27■□□□□ 0.2
CLK1P49759 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.2
CLK1P49759 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLK1P49759 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CLK1P49759 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.27■□□□□ 0.2
CLK1P49759 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLK1P49759 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.27■□□□□ 0.2
CLK1P49759 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.27■□□□□ 0.2
CLK1P49759 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.27■□□□□ 0.2
CLK1P49759 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CLK1P49759 AC005332.3-201ENST00000589904 676 ntBASIC16.27■□□□□ 0.2
CLK1P49759 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.27■□□□□ 0.2
CLK1P49759 AC004263.2-201ENST00000617183 678 ntBASIC16.27■□□□□ 0.2
CLK1P49759 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.27■□□□□ 0.2
CLK1P49759 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLK1P49759 AC106886.4-201ENST00000623557 2502 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms