Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 Z92544.3-201ENST00000624747 417 ntBASIC16.85■□□□□ 0.29
CSNK1EP49674 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.85■□□□□ 0.29
CSNK1EP49674 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1EP49674 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1EP49674 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1EP49674 AC009113.1-201ENST00000570267 2443 ntBASIC16.85■□□□□ 0.29
CSNK1EP49674 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 AC107918.2-201ENST00000530817 355 ntBASIC16.84■□□□□ 0.29
CSNK1EP49674 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 DUX4L27-201ENST00000554796 1261 ntBASIC16.84■□□□□ 0.29
CSNK1EP49674 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.84■□□□□ 0.29
CSNK1EP49674 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.84■□□□□ 0.29
CSNK1EP49674 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1EP49674 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1EP49674 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1EP49674 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1EP49674 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1EP49674 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CSNK1EP49674 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1EP49674 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1EP49674 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 TFAMP1-201ENST00000412727 736 ntBASIC16.83■□□□□ 0.28
CSNK1EP49674 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.83■□□□□ 0.28
CSNK1EP49674 AC079140.1-201ENST00000508039 487 ntBASIC16.83■□□□□ 0.28
CSNK1EP49674 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1EP49674 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1EP49674 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 LINC01451-201ENST00000623792 534 ntBASIC16.83■□□□□ 0.28
CSNK1EP49674 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1EP49674 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.83■□□□□ 0.28
CSNK1EP49674 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.28
CSNK1EP49674 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1EP49674 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1EP49674 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms