Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CENPAP49450 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CENPAP49450 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.72■□□□□ 0.11
CENPAP49450 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CENPAP49450 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CENPAP49450 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.71■□□□□ 0.11
CENPAP49450 AC097374.2-201ENST00000618617 1306 ntBASIC15.71■□□□□ 0.11
CENPAP49450 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CENPAP49450 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 AP001094.4-201ENST00000579008 2176 ntBASIC15.71■□□□□ 0.11
CENPAP49450 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 AC096633.1-201ENST00000422446 749 ntBASIC15.71■□□□□ 0.11
CENPAP49450 AC068472.1-201ENST00000474589 881 ntBASIC15.71■□□□□ 0.11
CENPAP49450 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.71■□□□□ 0.11
CENPAP49450 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CENPAP49450 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.71■□□□□ 0.11
CENPAP49450 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.71■□□□□ 0.11
CENPAP49450 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
CENPAP49450 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CENPAP49450 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CENPAP49450 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.71■□□□□ 0.1
CENPAP49450 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CENPAP49450 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CENPAP49450 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CENPAP49450 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CENPAP49450 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CENPAP49450 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CENPAP49450 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.71■□□□□ 0.1
CENPAP49450 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CENPAP49450 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.7■□□□□ 0.1
CENPAP49450 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CENPAP49450 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
CENPAP49450 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CENPAP49450 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.7■□□□□ 0.1
CENPAP49450 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.7■□□□□ 0.1
CENPAP49450 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CENPAP49450 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CENPAP49450 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 NORAD-201ENST00000565493 5339 ntBASIC15.7■□□□□ 0.1
CENPAP49450 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CENPAP49450 AL365209.1-201ENST00000624418 6473 ntBASIC15.7■□□□□ 0.1
CENPAP49450 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CENPAP49450 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 AC002558.1-201ENST00000488906 803 ntBASIC15.69■□□□□ 0.1
CENPAP49450 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPAP49450 LINC01238-205ENST00000567549 1107 ntBASIC15.69■□□□□ 0.1
CENPAP49450 RNF126P1-202ENST00000569893 925 ntBASIC15.69■□□□□ 0.1
CENPAP49450 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPAP49450 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.69■□□□□ 0.1
CENPAP49450 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms