Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC34P49427 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC34P49427 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
CDC34P49427 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.69□□□□□ -0.22
CDC34P49427 AC104771.1-201ENST00000603335 964 ntBASIC13.69□□□□□ -0.22
CDC34P49427 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC34P49427 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDC34P49427 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC34P49427 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 AC132872.4-202ENST00000622924 2756 ntBASIC13.68□□□□□ -0.22
CDC34P49427 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDC34P49427 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.68□□□□□ -0.22
CDC34P49427 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 KRT18P65-201ENST00000439811 1286 ntBASIC13.68□□□□□ -0.22
CDC34P49427 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.68□□□□□ -0.22
CDC34P49427 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC34P49427 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CDC34P49427 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CDC34P49427 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms