Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSR1P43307 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR1P43307 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSR1P43307 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR1P43307 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSR1P43307 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.41■□□□□ 0.54
SSR1P43307 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 AC022211.2-201ENST00000585075 2527 ntBASIC18.41■□□□□ 0.54
SSR1P43307 AD000864.1-201ENST00000624076 2295 ntBASIC18.41■□□□□ 0.54
SSR1P43307 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SSR1P43307 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 AL031133.1-201ENST00000406807 723 ntBASIC18.41■□□□□ 0.54
SSR1P43307 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 AC005104.2-201ENST00000427818 678 ntBASIC18.41■□□□□ 0.54
SSR1P43307 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSR1P43307 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 BX276092.5-203ENST00000456199 560 ntBASIC18.41■□□□□ 0.54
SSR1P43307 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.41■□□□□ 0.54
SSR1P43307 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.41■□□□□ 0.54
SSR1P43307 KRT8P26-201ENST00000534154 1276 ntBASIC18.41■□□□□ 0.54
SSR1P43307 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SSR1P43307 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.41■□□□□ 0.54
SSR1P43307 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.41■□□□□ 0.54
SSR1P43307 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSR1P43307 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SSR1P43307 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
SSR1P43307 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 COX5BP2-201ENST00000392354 334 ntBASIC18.4■□□□□ 0.54
SSR1P43307 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.4■□□□□ 0.54
SSR1P43307 AC007967.3-201ENST00000434308 558 ntBASIC18.4■□□□□ 0.54
SSR1P43307 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.4■□□□□ 0.54
SSR1P43307 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.4■□□□□ 0.54
SSR1P43307 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 AC087388.1-201ENST00000571370 1112 ntBASIC18.4■□□□□ 0.54
SSR1P43307 AL139327.4-201ENST00000612362 153 ntBASIC18.4■□□□□ 0.54
SSR1P43307 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 AC097374.2-201ENST00000618617 1306 ntBASIC18.4■□□□□ 0.54
SSR1P43307 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.4■□□□□ 0.54
SSR1P43307 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SSR1P43307 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SSR1P43307 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SSR1P43307 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SSR1P43307 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSR1P43307 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSR1P43307 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SSR1P43307 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SSR1P43307 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SSR1P43307 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR1P43307 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR1P43307 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.39■□□□□ 0.53
SSR1P43307 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
SSR1P43307 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SSR1P43307 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.39■□□□□ 0.53
SSR1P43307 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.39■□□□□ 0.53
SSR1P43307 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSR1P43307 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms