Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A2P43004 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A2P43004 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC1A2P43004 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A2P43004 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.23■□□□□ 0.35
SLC1A2P43004 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A2P43004 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SLC1A2P43004 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A2P43004 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC1A2P43004 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC1A2P43004 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A2P43004 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A2P43004 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A2P43004 POM121L3P-201ENST00000419331 1163 ntBASIC17.22■□□□□ 0.35
SLC1A2P43004 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC1A2P43004 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SLC1A2P43004 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC1A2P43004 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 AC010331.1-201ENST00000611423 582 ntBASIC17.22■□□□□ 0.35
SLC1A2P43004 AC093458.2-201ENST00000623150 629 ntBASIC17.22■□□□□ 0.35
SLC1A2P43004 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A2P43004 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A2P43004 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A2P43004 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A2P43004 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A2P43004 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC1A2P43004 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A2P43004 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A2P43004 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A2P43004 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A2P43004 FLJ38576-201ENST00000623820 2459 ntBASIC17.21■□□□□ 0.34
SLC1A2P43004 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A2P43004 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A2P43004 AC124067.4-201ENST00000519691 2379 ntBASIC17.21■□□□□ 0.34
SLC1A2P43004 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC1A2P43004 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A2P43004 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A2P43004 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SLC1A2P43004 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A2P43004 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SLC1A2P43004 SPDYE21P-201ENST00000413323 827 ntBASIC17.2■□□□□ 0.34
SLC1A2P43004 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC1A2P43004 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC1A2P43004 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC1A2P43004 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SLC1A2P43004 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A2P43004 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A2P43004 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms