Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE6BP35913 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 AL353732.1-201ENST00000569618 1459 ntBASIC21.1■□□□□ 0.97
PDE6BP35913 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE6BP35913 AC004890.2-204ENST00000481968 304 ntBASIC21.1■□□□□ 0.97
PDE6BP35913 SERBP1P5-201ENST00000510079 1181 ntBASIC21.1■□□□□ 0.97
PDE6BP35913 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6BP35913 AC027307.2-201ENST00000591252 911 ntBASIC21.1■□□□□ 0.97
PDE6BP35913 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6BP35913 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE6BP35913 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
PDE6BP35913 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE6BP35913 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDE6BP35913 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PDE6BP35913 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDE6BP35913 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6BP35913 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE6BP35913 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.09■□□□□ 0.97
PDE6BP35913 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 PIN1P1-201ENST00000412108 996 ntBASIC21.09■□□□□ 0.97
PDE6BP35913 HCG4-201ENST00000418983 998 ntBASIC21.09■□□□□ 0.97
PDE6BP35913 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.09■□□□□ 0.97
PDE6BP35913 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
PDE6BP35913 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
PDE6BP35913 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDE6BP35913 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.09■□□□□ 0.97
PDE6BP35913 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDE6BP35913 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDE6BP35913 AC025048.6-201ENST00000634326 1161 ntBASIC21.09■□□□□ 0.97
PDE6BP35913 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PDE6BP35913 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.09■□□□□ 0.97
PDE6BP35913 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.09■□□□□ 0.97
PDE6BP35913 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.09■□□□□ 0.97
PDE6BP35913 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6BP35913 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6BP35913 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6BP35913 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6BP35913 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.08■□□□□ 0.97
PDE6BP35913 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.08■□□□□ 0.97
PDE6BP35913 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.08■□□□□ 0.97
PDE6BP35913 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
PDE6BP35913 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.08■□□□□ 0.97
PDE6BP35913 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDE6BP35913 SPDYE22P-201ENST00000582158 798 ntBASIC21.08■□□□□ 0.97
PDE6BP35913 MIR4453-201ENST00000584019 89 ntBASIC21.08■□□□□ 0.97
PDE6BP35913 AL008721.1-201ENST00000609964 604 ntBASIC21.08■□□□□ 0.97
PDE6BP35913 AL662799.1-202ENST00000614205 422 ntBASIC21.08■□□□□ 0.97
PDE6BP35913 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.08■□□□□ 0.97
PDE6BP35913 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6BP35913 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.08■□□□□ 0.96
PDE6BP35913 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6BP35913 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6BP35913 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.08■□□□□ 0.96
PDE6BP35913 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6BP35913 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PDE6BP35913 OR8S1-201ENST00000310194 1080 ntBASIC21.07■□□□□ 0.96
PDE6BP35913 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.07■□□□□ 0.96
PDE6BP35913 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.07■□□□□ 0.96
PDE6BP35913 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.07■□□□□ 0.96
PDE6BP35913 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.07■□□□□ 0.96
PDE6BP35913 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.07■□□□□ 0.96
PDE6BP35913 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6BP35913 AC009118.2-201ENST00000613275 655 ntBASIC21.07■□□□□ 0.96
PDE6BP35913 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.07■□□□□ 0.96
PDE6BP35913 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms