Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
THBS4P35443 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 COX5BP2-201ENST00000392354 334 ntBASIC15.22■□□□□ 0.03
THBS4P35443 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.22■□□□□ 0.03
THBS4P35443 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.22■□□□□ 0.03
THBS4P35443 AC009078.2-202ENST00000463353 338 ntBASIC15.22■□□□□ 0.03
THBS4P35443 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS4P35443 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.22■□□□□ 0.03
THBS4P35443 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.22■□□□□ 0.03
THBS4P35443 AL355877.3-201ENST00000622820 899 ntBASIC15.22■□□□□ 0.03
THBS4P35443 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS4P35443 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
THBS4P35443 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS4P35443 AL139384.1-201ENST00000612143 3047 ntBASIC15.22■□□□□ 0.03
THBS4P35443 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
THBS4P35443 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THBS4P35443 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THBS4P35443 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 AP005117.1-201ENST00000584346 1413 ntBASIC15.21■□□□□ 0.03
THBS4P35443 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
THBS4P35443 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.21■□□□□ 0.03
THBS4P35443 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 RBM17P3-201ENST00000417687 1192 ntBASIC15.21■□□□□ 0.03
THBS4P35443 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
THBS4P35443 AC122714.2-201ENST00000502787 707 ntBASIC15.21■□□□□ 0.03
THBS4P35443 AC106795.1-205ENST00000512851 1056 ntBASIC15.21■□□□□ 0.03
THBS4P35443 AP002469.2-201ENST00000531724 424 ntBASIC15.21■□□□□ 0.03
THBS4P35443 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS4P35443 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS4P35443 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS4P35443 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS4P35443 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.21■□□□□ 0.02
THBS4P35443 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.21■□□□□ 0.02
THBS4P35443 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THBS4P35443 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS4P35443 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS4P35443 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS4P35443 FDX1P1-201ENST00000449115 551 ntBASIC15.2■□□□□ 0.02
THBS4P35443 AC002558.1-201ENST00000488906 803 ntBASIC15.2■□□□□ 0.02
THBS4P35443 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THBS4P35443 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.2■□□□□ 0.02
THBS4P35443 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.2■□□□□ 0.02
THBS4P35443 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms