Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFC1P35251 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC1P35251 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC1P35251 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RFC1P35251 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC1P35251 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC1P35251 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RFC1P35251 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.22■□□□□ 0.51
RFC1P35251 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.22■□□□□ 0.51
RFC1P35251 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 AP001269.4-201ENST00000609611 512 ntBASIC18.22■□□□□ 0.51
RFC1P35251 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC1P35251 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
RFC1P35251 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RFC1P35251 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC1P35251 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 SPDYE21P-201ENST00000413323 827 ntBASIC18.21■□□□□ 0.51
RFC1P35251 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.21■□□□□ 0.51
RFC1P35251 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.21■□□□□ 0.51
RFC1P35251 AL732292.2-201ENST00000609649 430 ntBASIC18.21■□□□□ 0.51
RFC1P35251 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RFC1P35251 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 AP005117.1-201ENST00000584346 1413 ntBASIC18.21■□□□□ 0.51
RFC1P35251 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFC1P35251 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RFC1P35251 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
RFC1P35251 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC1P35251 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RFC1P35251 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RFC1P35251 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RFC1P35251 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RFC1P35251 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC1P35251 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.2■□□□□ 0.5
RFC1P35251 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC1P35251 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFC1P35251 TSPY19P-201ENST00000418461 509 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms