Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.02■□□□□ 0.16
LCN1P31025 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.02■□□□□ 0.15
LCN1P31025 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.02■□□□□ 0.15
LCN1P31025 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LCN1P31025 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCN1P31025 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.01■□□□□ 0.15
LCN1P31025 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LCN1P31025 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 AC132008.2-207ENST00000454517 770 ntBASIC16.01■□□□□ 0.15
LCN1P31025 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
LCN1P31025 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.01■□□□□ 0.15
LCN1P31025 AC011270.2-201ENST00000624293 2550 ntBASIC16.01■□□□□ 0.15
LCN1P31025 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LCN1P31025 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCN1P31025 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16■□□□□ 0.15
LCN1P31025 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16■□□□□ 0.15
LCN1P31025 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LCN1P31025 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LCN1P31025 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LCN1P31025 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16■□□□□ 0.15
LCN1P31025 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16■□□□□ 0.15
LCN1P31025 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16■□□□□ 0.15
LCN1P31025 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16■□□□□ 0.15
LCN1P31025 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16■□□□□ 0.15
LCN1P31025 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16■□□□□ 0.15
LCN1P31025 AL139288.1-201ENST00000623748 933 ntBASIC16■□□□□ 0.15
LCN1P31025 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16■□□□□ 0.15
LCN1P31025 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LCN1P31025 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCN1P31025 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LCN1P31025 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16■□□□□ 0.15
LCN1P31025 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LCN1P31025 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16■□□□□ 0.15
LCN1P31025 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.99■□□□□ 0.15
LCN1P31025 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCN1P31025 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCN1P31025 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCN1P31025 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
LCN1P31025 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCN1P31025 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LCN1P31025 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCN1P31025 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms