Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GDF1P27539 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.67■□□□□ 0.1
GDF1P27539 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GDF1P27539 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.67■□□□□ 0.1
GDF1P27539 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDF1P27539 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.67■□□□□ 0.1
GDF1P27539 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF1P27539 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF1P27539 AP002414.1-201ENST00000391405 1147 ntBASIC15.66■□□□□ 0.1
GDF1P27539 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.66■□□□□ 0.1
GDF1P27539 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 KRT18P3-201ENST00000451602 1288 ntBASIC15.66■□□□□ 0.1
GDF1P27539 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.66■□□□□ 0.1
GDF1P27539 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF1P27539 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.66■□□□□ 0.1
GDF1P27539 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.66■□□□□ 0.1
GDF1P27539 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GDF1P27539 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF1P27539 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 PI4KAP1-204ENST00000612579 1703 ntBASIC15.65■□□□□ 0.1
GDF1P27539 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GDF1P27539 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF1P27539 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GDF1P27539 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 CRYGEP-201ENST00000412192 528 ntBASIC15.65■□□□□ 0.1
GDF1P27539 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
GDF1P27539 IGHV3-65-201ENST00000523210 341 ntBASIC15.65■□□□□ 0.1
GDF1P27539 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF1P27539 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 GGTLC5P-201ENST00000617623 998 ntBASIC15.65■□□□□ 0.1
GDF1P27539 AC023511.2-201ENST00000618803 211 ntBASIC15.65■□□□□ 0.1
GDF1P27539 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF1P27539 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF1P27539 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
GDF1P27539 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
GDF1P27539 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.64■□□□□ 0.1
GDF1P27539 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.64■□□□□ 0.1
GDF1P27539 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GDF1P27539 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.64■□□□□ 0.09
GDF1P27539 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 MRPL20P1-201ENST00000400819 433 ntBASIC15.64■□□□□ 0.09
GDF1P27539 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms