Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC130P13994 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC130P13994 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC130P13994 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CCDC130P13994 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC130P13994 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC130P13994 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC130P13994 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC130P13994 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 PTCHD3P3-201ENST00000403073 906 ntBASIC18.28■□□□□ 0.52
CCDC130P13994 RPS15P9-201ENST00000494093 319 ntBASIC18.28■□□□□ 0.52
CCDC130P13994 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC130P13994 RNA5SP415-201ENST00000517246 115 ntBASIC18.28■□□□□ 0.52
CCDC130P13994 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC130P13994 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC130P13994 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC130P13994 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 AC016396.2-201ENST00000562575 1417 ntBASIC18.28■□□□□ 0.52
CCDC130P13994 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC130P13994 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC130P13994 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC130P13994 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC130P13994 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CCDC130P13994 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC130P13994 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC130P13994 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC130P13994 UNC93B6-202ENST00000528242 690 ntBASIC18.27■□□□□ 0.52
CCDC130P13994 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC130P13994 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC130P13994 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC130P13994 AC005593.1-201ENST00000624894 515 ntBASIC18.27■□□□□ 0.52
CCDC130P13994 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC130P13994 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC130P13994 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC130P13994 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CCDC130P13994 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC130P13994 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC130P13994 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC130P13994 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC130P13994 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC130P13994 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC130P13994 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC130P13994 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC130P13994 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC130P13994 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC130P13994 GPR89P-201ENST00000407924 1495 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 AC093525.9-201ENST00000624961 1746 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC130P13994 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC130P13994 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC130P13994 AC104109.2-201ENST00000602919 1418 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 AC116353.5-201ENST00000638148 1699 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC130P13994 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC130P13994 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC130P13994 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 RPL13AP23-201ENST00000480739 586 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC130P13994 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC130P13994 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC130P13994 AF228730.7-201ENST00000641842 219 ntBASIC18.26■□□□□ 0.51
CCDC130P13994 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC130P13994 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC130P13994 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC130P13994 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC130P13994 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms