Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 NME2P1-201ENST00000426182 414 ntBASIC20.84■□□□□ 0.93
COL11A2P13942 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AC140912.1-201ENST00000577171 1054 ntBASIC20.84■□□□□ 0.93
COL11A2P13942 AC027307.3-201ENST00000594262 1100 ntBASIC20.84■□□□□ 0.93
COL11A2P13942 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COL11A2P13942 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COL11A2P13942 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.84■□□□□ 0.93
COL11A2P13942 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.84■□□□□ 0.93
COL11A2P13942 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AC079776.1-201ENST00000401540 1152 ntBASIC20.84■□□□□ 0.93
COL11A2P13942 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.84■□□□□ 0.93
COL11A2P13942 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
COL11A2P13942 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL11A2P13942 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL11A2P13942 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.83■□□□□ 0.93
COL11A2P13942 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.83■□□□□ 0.93
COL11A2P13942 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL11A2P13942 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL11A2P13942 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
COL11A2P13942 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL11A2P13942 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL11A2P13942 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.83■□□□□ 0.92
COL11A2P13942 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
COL11A2P13942 AC004233.3-201ENST00000607794 1269 ntBASIC20.83■□□□□ 0.92
COL11A2P13942 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.83■□□□□ 0.92
COL11A2P13942 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A2P13942 AP3S2-216ENST00000617003 1561 ntBASIC20.83■□□□□ 0.92
COL11A2P13942 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A2P13942 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
COL11A2P13942 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A2P13942 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
COL11A2P13942 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A2P13942 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A2P13942 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.83■□□□□ 0.92
COL11A2P13942 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.82■□□□□ 0.92
COL11A2P13942 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.82■□□□□ 0.92
COL11A2P13942 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
COL11A2P13942 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.82■□□□□ 0.92
COL11A2P13942 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.82■□□□□ 0.92
COL11A2P13942 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A2P13942 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.81■□□□□ 0.92
COL11A2P13942 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 AC073389.1-201ENST00000595595 795 ntBASIC20.81■□□□□ 0.92
COL11A2P13942 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.81■□□□□ 0.92
COL11A2P13942 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 AC131009.4-201ENST00000624048 1740 ntBASIC20.81■□□□□ 0.92
COL11A2P13942 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A2P13942 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A2P13942 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.81■□□□□ 0.92
COL11A2P13942 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.81■□□□□ 0.92
COL11A2P13942 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms