Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH1P12830 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.87■□□□□ 0.29
CDH1P12830 KRT18P31-201ENST00000506277 1292 ntBASIC16.87■□□□□ 0.29
CDH1P12830 STK25P1-201ENST00000585406 838 ntBASIC16.87■□□□□ 0.29
CDH1P12830 AC073592.5-201ENST00000624854 528 ntBASIC16.87■□□□□ 0.29
CDH1P12830 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH1P12830 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH1P12830 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH1P12830 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH1P12830 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CDH1P12830 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TSPY19P-201ENST00000418461 509 ntBASIC16.86■□□□□ 0.29
CDH1P12830 TSPY18P-201ENST00000441642 509 ntBASIC16.86■□□□□ 0.29
CDH1P12830 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH1P12830 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 AC132938.5-201ENST00000624980 1813 ntBASIC16.86■□□□□ 0.29
CDH1P12830 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDH1P12830 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH1P12830 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH1P12830 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH1P12830 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH1P12830 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH1P12830 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH1P12830 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH1P12830 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH1P12830 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH1P12830 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH1P12830 AC132008.2-207ENST00000454517 770 ntBASIC16.85■□□□□ 0.29
CDH1P12830 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH1P12830 AC091304.2-201ENST00000564639 760 ntBASIC16.85■□□□□ 0.29
CDH1P12830 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH1P12830 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH1P12830 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH1P12830 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH1P12830 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms