Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.31■□□□□ 0.36
SRFP11831 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.31■□□□□ 0.36
SRFP11831 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.31■□□□□ 0.36
SRFP11831 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.31■□□□□ 0.36
SRFP11831 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 CU639417.3-201ENST00000624240 1404 ntBASIC17.3■□□□□ 0.36
SRFP11831 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 KRT17P7-201ENST00000451704 1104 ntBASIC17.3■□□□□ 0.36
SRFP11831 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.3■□□□□ 0.36
SRFP11831 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SRFP11831 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFP11831 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFP11831 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFP11831 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.29■□□□□ 0.36
SRFP11831 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.29■□□□□ 0.36
SRFP11831 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFP11831 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.29■□□□□ 0.36
SRFP11831 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRFP11831 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.29■□□□□ 0.36
SRFP11831 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SRFP11831 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.29■□□□□ 0.36
SRFP11831 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SRFP11831 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFP11831 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SRFP11831 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFP11831 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRFP11831 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFP11831 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SRFP11831 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 SPTLC1P1-201ENST00000447199 261 ntBASIC17.28■□□□□ 0.36
SRFP11831 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFP11831 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 AC018529.1-201ENST00000613063 361 ntBASIC17.28■□□□□ 0.36
SRFP11831 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.28■□□□□ 0.36
SRFP11831 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRFP11831 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SRFP11831 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRFP11831 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFP11831 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms