Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.3■□□□□ 0.84
TOP1P11387 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TOP1P11387 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TOP1P11387 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.3■□□□□ 0.84
TOP1P11387 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.3■□□□□ 0.84
TOP1P11387 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOP1P11387 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TOP1P11387 PRORSD1P-202ENST00000563365 2154 ntBASIC20.29■□□□□ 0.84
TOP1P11387 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TOP1P11387 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.29■□□□□ 0.84
TOP1P11387 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TOP1P11387 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.29■□□□□ 0.84
TOP1P11387 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.29■□□□□ 0.84
TOP1P11387 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.29■□□□□ 0.84
TOP1P11387 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.29■□□□□ 0.84
TOP1P11387 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.29■□□□□ 0.84
TOP1P11387 AC005593.1-201ENST00000624894 515 ntBASIC20.29■□□□□ 0.84
TOP1P11387 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TOP1P11387 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOP1P11387 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 AC104109.2-201ENST00000602919 1418 ntBASIC20.28■□□□□ 0.84
TOP1P11387 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.28■□□□□ 0.84
TOP1P11387 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.28■□□□□ 0.84
TOP1P11387 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 MIR574-201ENST00000385209 96 ntBASIC20.28■□□□□ 0.84
TOP1P11387 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TOP1P11387 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.28■□□□□ 0.84
TOP1P11387 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 UNC93B6-202ENST00000528242 690 ntBASIC20.28■□□□□ 0.84
TOP1P11387 AL671883.3-201ENST00000603274 991 ntBASIC20.28■□□□□ 0.84
TOP1P11387 Z83851.2-201ENST00000609564 659 ntBASIC20.28■□□□□ 0.84
TOP1P11387 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.28■□□□□ 0.84
TOP1P11387 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TOP1P11387 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOP1P11387 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
TOP1P11387 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.27■□□□□ 0.84
TOP1P11387 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.27■□□□□ 0.84
TOP1P11387 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 ZNF259P1-201ENST00000407656 1365 ntBASIC20.27■□□□□ 0.84
TOP1P11387 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.27■□□□□ 0.84
TOP1P11387 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.27■□□□□ 0.84
TOP1P11387 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.27■□□□□ 0.84
TOP1P11387 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOP1P11387 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.27■□□□□ 0.83
TOP1P11387 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TOP1P11387 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TOP1P11387 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.26■□□□□ 0.83
TOP1P11387 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TOP1P11387 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TOP1P11387 GPR89P-201ENST00000407924 1495 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms