Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SP9P0CG40 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SP9P0CG40 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SP9P0CG40 AL391825.1-201ENST00000457671 1364 ntBASIC16.81■□□□□ 0.28
SP9P0CG40 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SP9P0CG40 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.81■□□□□ 0.28
SP9P0CG40 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.81■□□□□ 0.28
SP9P0CG40 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SP9P0CG40 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.81■□□□□ 0.28
SP9P0CG40 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SP9P0CG40 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SP9P0CG40 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.81■□□□□ 0.28
SP9P0CG40 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
SP9P0CG40 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.81■□□□□ 0.28
SP9P0CG40 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.8■□□□□ 0.28
SP9P0CG40 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 AL035456.1-201ENST00000456064 1369 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SP9P0CG40 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.8■□□□□ 0.28
SP9P0CG40 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.8■□□□□ 0.28
SP9P0CG40 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.8■□□□□ 0.28
SP9P0CG40 AC105233.2-201ENST00000523697 349 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 AF228730.5-201ENST00000530288 346 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SP9P0CG40 MIR4525-201ENST00000580000 75 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SP9P0CG40 AL139327.4-201ENST00000612362 153 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.8■□□□□ 0.28
SP9P0CG40 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SP9P0CG40 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SP9P0CG40 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.79■□□□□ 0.28
SP9P0CG40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SP9P0CG40 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SP9P0CG40 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.79■□□□□ 0.28
SP9P0CG40 AC135586.1-201ENST00000539323 574 ntBASIC16.79■□□□□ 0.28
SP9P0CG40 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.79■□□□□ 0.28
SP9P0CG40 AL033527.4-201ENST00000641026 673 ntBASIC16.79■□□□□ 0.28
SP9P0CG40 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SP9P0CG40 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SP9P0CG40 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SP9P0CG40 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SP9P0CG40 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms