Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
APPP05067 LINC00982-205ENST00000420957 435 ntBASIC20.74■□□□□ 0.91
APPP05067 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.74■□□□□ 0.91
APPP05067 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.74■□□□□ 0.91
APPP05067 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.74■□□□□ 0.91
APPP05067 AC092910.1-201ENST00000482027 1129 ntBASIC20.74■□□□□ 0.91
APPP05067 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.74■□□□□ 0.91
APPP05067 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
APPP05067 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.74■□□□□ 0.91
APPP05067 MIR7706-201ENST00000613747 67 ntBASIC20.74■□□□□ 0.91
APPP05067 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.74■□□□□ 0.91
APPP05067 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.74■□□□□ 0.91
APPP05067 AC008735.5-201ENST00000623544 497 ntBASIC20.74■□□□□ 0.91
APPP05067 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.74■□□□□ 0.91
APPP05067 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APPP05067 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
APPP05067 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APPP05067 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
APPP05067 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
APPP05067 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
APPP05067 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APPP05067 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.73■□□□□ 0.91
APPP05067 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.73■□□□□ 0.91
APPP05067 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.73■□□□□ 0.91
APPP05067 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.73■□□□□ 0.91
APPP05067 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.73■□□□□ 0.91
APPP05067 AC105339.3-201ENST00000560043 636 ntBASIC20.73■□□□□ 0.91
APPP05067 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.73■□□□□ 0.91
APPP05067 AC116407.3-201ENST00000623905 1129 ntBASIC20.73■□□□□ 0.91
APPP05067 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.73■□□□□ 0.91
APPP05067 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
APPP05067 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APPP05067 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
APPP05067 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.72■□□□□ 0.91
APPP05067 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
APPP05067 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.72■□□□□ 0.91
APPP05067 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.72■□□□□ 0.91
APPP05067 AL590627.1-203ENST00000421194 1026 ntBASIC20.72■□□□□ 0.91
APPP05067 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.72■□□□□ 0.91
APPP05067 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.72■□□□□ 0.91
APPP05067 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.72■□□□□ 0.91
APPP05067 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.72■□□□□ 0.91
APPP05067 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.72■□□□□ 0.91
APPP05067 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.72■□□□□ 0.91
APPP05067 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.72■□□□□ 0.91
APPP05067 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
APPP05067 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.72■□□□□ 0.91
APPP05067 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.72■□□□□ 0.91
APPP05067 AC006557.2-201ENST00000592985 1240 ntBASIC20.72■□□□□ 0.91
APPP05067 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
APPP05067 AP002414.3-201ENST00000589352 1468 ntBASIC20.72■□□□□ 0.91
APPP05067 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.72■□□□□ 0.91
APPP05067 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 AL138688.1-201ENST00000624851 1594 ntBASIC20.72■□□□□ 0.91
APPP05067 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APPP05067 AC243591.1-201ENST00000452967 1364 ntBASIC20.72■□□□□ 0.91
APPP05067 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
APPP05067 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
APPP05067 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.71■□□□□ 0.91
APPP05067 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APPP05067 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.71■□□□□ 0.91
APPP05067 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms