Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CD74P04233 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 RBM17P1-201ENST00000453646 1190 ntBASIC14.54□□□□□ -0.08
CD74P04233 AP002490.2-201ENST00000524791 560 ntBASIC14.54□□□□□ -0.08
CD74P04233 AC233702.5-201ENST00000584107 538 ntBASIC14.54□□□□□ -0.08
CD74P04233 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.54□□□□□ -0.08
CD74P04233 AL049637.2-201ENST00000641778 930 ntBASIC14.54□□□□□ -0.08
CD74P04233 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.54□□□□□ -0.08
CD74P04233 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD74P04233 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.54□□□□□ -0.08
CD74P04233 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CD74P04233 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 AC079328.2-201ENST00000561241 3354 ntBASIC14.54□□□□□ -0.08
CD74P04233 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD74P04233 CROCCP1-201ENST00000426910 5675 ntBASIC14.54□□□□□ -0.08
CD74P04233 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD74P04233 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CD74P04233 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 FRMD8P1-201ENST00000440433 1524 ntBASIC14.53□□□□□ -0.08
CD74P04233 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 AC097374.2-201ENST00000618617 1306 ntBASIC14.53□□□□□ -0.08
CD74P04233 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TSPY14P-201ENST00000303979 915 ntBASIC14.53□□□□□ -0.08
CD74P04233 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.53□□□□□ -0.08
CD74P04233 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 C2orf69P3-201ENST00000565542 1120 ntBASIC14.53□□□□□ -0.08
CD74P04233 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
CD74P04233 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.53□□□□□ -0.08
CD74P04233 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD74P04233 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CD74P04233 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.52□□□□□ -0.08
CD74P04233 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD74P04233 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CD74P04233 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms