Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VTNP04004 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.85■□□□□ 0.61
VTNP04004 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.85■□□□□ 0.61
VTNP04004 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.85■□□□□ 0.61
VTNP04004 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.85■□□□□ 0.61
VTNP04004 AC091812.2-201ENST00000619081 385 ntBASIC18.85■□□□□ 0.61
VTNP04004 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.85■□□□□ 0.61
VTNP04004 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTNP04004 AC092919.2-201ENST00000623631 1645 ntBASIC18.85■□□□□ 0.61
VTNP04004 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
VTNP04004 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VTNP04004 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VTNP04004 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
VTNP04004 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.84■□□□□ 0.61
VTNP04004 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
VTNP04004 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VTNP04004 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.84■□□□□ 0.61
VTNP04004 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.84■□□□□ 0.61
VTNP04004 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.84■□□□□ 0.61
VTNP04004 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTNP04004 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTNP04004 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTNP04004 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VTNP04004 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.83■□□□□ 0.61
VTNP04004 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTNP04004 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.83■□□□□ 0.61
VTNP04004 AC129492.6-201ENST00000611383 1305 ntBASIC18.83■□□□□ 0.61
VTNP04004 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.61
VTNP04004 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTNP04004 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTNP04004 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.83■□□□□ 0.6
VTNP04004 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VTNP04004 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.83■□□□□ 0.6
VTNP04004 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.83■□□□□ 0.6
VTNP04004 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.83■□□□□ 0.6
VTNP04004 AC107918.2-201ENST00000530817 355 ntBASIC18.83■□□□□ 0.6
VTNP04004 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.83■□□□□ 0.6
VTNP04004 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VTNP04004 SNHG9-202ENST00000564014 471 ntBASIC18.83■□□□□ 0.6
VTNP04004 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.83■□□□□ 0.6
VTNP04004 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VTNP04004 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTNP04004 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VTNP04004 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VTNP04004 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.83■□□□□ 0.6
VTNP04004 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTNP04004 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VTNP04004 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VTNP04004 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VTNP04004 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTNP04004 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.82■□□□□ 0.6
VTNP04004 PMS2P2-201ENST00000425039 1128 ntBASIC18.82■□□□□ 0.6
VTNP04004 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VTNP04004 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms