Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 AC026691.1-201ENST00000602502 2017 ntBASIC16.35■□□□□ 0.21
MT-ND1P03886 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.35■□□□□ 0.21
MT-ND1P03886 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 AC034232.1-201ENST00000506026 1064 ntBASIC16.35■□□□□ 0.21
MT-ND1P03886 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
MT-ND1P03886 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.35■□□□□ 0.21
MT-ND1P03886 AL138966.2-201ENST00000621997 464 ntBASIC16.35■□□□□ 0.21
MT-ND1P03886 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.35■□□□□ 0.21
MT-ND1P03886 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.35■□□□□ 0.21
MT-ND1P03886 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 BX276092.7-203ENST00000637198 1536 ntBASIC16.35■□□□□ 0.21
MT-ND1P03886 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC092364.2-201ENST00000596710 2692 ntBASIC16.34■□□□□ 0.21
MT-ND1P03886 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-ND1P03886 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-ND1P03886 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC113404.2-201ENST00000507884 177 ntBASIC16.34■□□□□ 0.21
MT-ND1P03886 GCSHP2-201ENST00000560971 527 ntBASIC16.34■□□□□ 0.21
MT-ND1P03886 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.34■□□□□ 0.21
MT-ND1P03886 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
MT-ND1P03886 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MT-ND1P03886 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MT-ND1P03886 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.33■□□□□ 0.21
MT-ND1P03886 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
MT-ND1P03886 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MT-ND1P03886 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MT-ND1P03886 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MT-ND1P03886 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MT-ND1P03886 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms