Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC010654.1-201ENST00000615722 808 ntBASIC20.56■□□□□ 0.88
MBD4O95243 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD4O95243 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MBD4O95243 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD4O95243 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MBD4O95243 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD4O95243 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD4O95243 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MBD4O95243 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.55■□□□□ 0.88
MBD4O95243 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD4O95243 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MBD4O95243 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.55■□□□□ 0.88
MBD4O95243 RNA5SP416-201ENST00000516838 111 ntBASIC20.55■□□□□ 0.88
MBD4O95243 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.55■□□□□ 0.88
MBD4O95243 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MBD4O95243 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD4O95243 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MBD4O95243 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD4O95243 AC087163.2-201ENST00000457299 853 ntBASIC20.54■□□□□ 0.88
MBD4O95243 SLC25A6P2-201ENST00000497974 877 ntBASIC20.54■□□□□ 0.88
MBD4O95243 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD4O95243 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.54■□□□□ 0.88
MBD4O95243 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MBD4O95243 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.54■□□□□ 0.88
MBD4O95243 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.54■□□□□ 0.88
MBD4O95243 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD4O95243 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD4O95243 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
MBD4O95243 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
MBD4O95243 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.53■□□□□ 0.88
MBD4O95243 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 AC018845.2-201ENST00000568326 409 ntBASIC20.53■□□□□ 0.88
MBD4O95243 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 AC023511.2-201ENST00000618803 211 ntBASIC20.53■□□□□ 0.88
MBD4O95243 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD4O95243 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MBD4O95243 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD4O95243 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MBD4O95243 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD4O95243 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.52■□□□□ 0.88
MBD4O95243 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.52■□□□□ 0.88
MBD4O95243 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 AC139713.2-201ENST00000641328 2723 ntBASIC20.52■□□□□ 0.88
MBD4O95243 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.52■□□□□ 0.88
MBD4O95243 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MBD4O95243 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MBD4O95243 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms