Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NKX2-2O95096 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-2O95096 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 AL590787.1-201ENST00000568856 1315 ntBASIC15.93■□□□□ 0.14
NKX2-2O95096 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NKX2-2O95096 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX2-2O95096 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NKX2-2O95096 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.92■□□□□ 0.14
NKX2-2O95096 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NKX2-2O95096 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-2O95096 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-2O95096 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX2-2O95096 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-2O95096 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX2-2O95096 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NKX2-2O95096 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NKX2-2O95096 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
NKX2-2O95096 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.91■□□□□ 0.14
NKX2-2O95096 AC021087.4-201ENST00000563761 564 ntBASIC15.91■□□□□ 0.14
NKX2-2O95096 AC139887.3-201ENST00000568585 713 ntBASIC15.91■□□□□ 0.14
NKX2-2O95096 AC025062.2-201ENST00000605477 670 ntBASIC15.91■□□□□ 0.14
NKX2-2O95096 AL139424.1-201ENST00000607572 797 ntBASIC15.91■□□□□ 0.14
NKX2-2O95096 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX2-2O95096 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX2-2O95096 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NKX2-2O95096 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
NKX2-2O95096 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
NKX2-2O95096 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 AP002414.1-201ENST00000391405 1147 ntBASIC15.9■□□□□ 0.14
NKX2-2O95096 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.9■□□□□ 0.14
NKX2-2O95096 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.9■□□□□ 0.14
NKX2-2O95096 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX2-2O95096 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NKX2-2O95096 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms