Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN2BO60939 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN2BO60939 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
SCN2BO60939 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN2BO60939 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 RNF216P1-203ENST00000404404 2427 ntBASIC16.4■□□□□ 0.22
SCN2BO60939 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.4■□□□□ 0.22
SCN2BO60939 KRT18P21-201ENST00000515767 1272 ntBASIC16.4■□□□□ 0.22
SCN2BO60939 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN2BO60939 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 AC111152.3-201ENST00000569699 673 ntBASIC16.4■□□□□ 0.22
SCN2BO60939 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.4■□□□□ 0.22
SCN2BO60939 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.4■□□□□ 0.22
SCN2BO60939 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCN2BO60939 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.4■□□□□ 0.22
SCN2BO60939 AC092068.3-201ENST00000587894 2016 ntBASIC16.4■□□□□ 0.22
SCN2BO60939 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.4■□□□□ 0.22
SCN2BO60939 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
SCN2BO60939 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.39■□□□□ 0.22
SCN2BO60939 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
SCN2BO60939 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 EGFEM1P-202ENST00000431685 1563 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 PCDHA14-201ENST00000506751 2298 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 TMPOP1-202ENST00000424642 1267 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN2BO60939 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN2BO60939 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN2BO60939 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 AC011467.2-201ENST00000598425 242 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.39■□□□□ 0.21
SCN2BO60939 AD001527.2-201ENST00000622994 785 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 AL135999.2-201ENST00000622438 1686 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 TNRC18P3-201ENST00000441896 2691 ntBASIC16.39■□□□□ 0.21
SCN2BO60939 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN2BO60939 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN2BO60939 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN2BO60939 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.38■□□□□ 0.21
SCN2BO60939 AC016734.2-201ENST00000624325 1377 ntBASIC16.38■□□□□ 0.21
SCN2BO60939 AC078925.2-201ENST00000624013 1973 ntBASIC16.38■□□□□ 0.21
SCN2BO60939 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN2BO60939 AC132938.5-201ENST00000624980 1813 ntBASIC16.38■□□□□ 0.21
SCN2BO60939 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN2BO60939 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN2BO60939 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN2BO60939 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms