Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC004967.1-201ENST00000453589 447 ntBASIC17.77■□□□□ 0.44
COCHO43405 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.77■□□□□ 0.44
COCHO43405 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.77■□□□□ 0.44
COCHO43405 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
COCHO43405 AC107918.2-201ENST00000530817 355 ntBASIC17.77■□□□□ 0.44
COCHO43405 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COCHO43405 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.77■□□□□ 0.44
COCHO43405 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
COCHO43405 AL078644.1-201ENST00000609881 752 ntBASIC17.77■□□□□ 0.44
COCHO43405 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COCHO43405 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COCHO43405 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COCHO43405 EGFEM1P-202ENST00000431685 1563 ntBASIC17.77■□□□□ 0.44
COCHO43405 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COCHO43405 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COCHO43405 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.77■□□□□ 0.44
COCHO43405 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COCHO43405 AC093525.9-201ENST00000624961 1746 ntBASIC17.77■□□□□ 0.44
COCHO43405 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.77■□□□□ 0.43
COCHO43405 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.77■□□□□ 0.43
COCHO43405 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.77■□□□□ 0.43
COCHO43405 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COCHO43405 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
COCHO43405 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.76■□□□□ 0.43
COCHO43405 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.76■□□□□ 0.43
COCHO43405 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 RPS8P6-201ENST00000426177 609 ntBASIC17.76■□□□□ 0.43
COCHO43405 AC074386.1-202ENST00000463561 864 ntBASIC17.76■□□□□ 0.43
COCHO43405 YBX1P5-201ENST00000509441 847 ntBASIC17.76■□□□□ 0.43
COCHO43405 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COCHO43405 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COCHO43405 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COCHO43405 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.76■□□□□ 0.43
COCHO43405 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COCHO43405 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COCHO43405 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COCHO43405 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 AC116353.5-201ENST00000638148 1699 ntBASIC17.75■□□□□ 0.43
COCHO43405 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COCHO43405 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.75■□□□□ 0.43
COCHO43405 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 HTR5BP-201ENST00000430851 1154 ntBASIC17.75■□□□□ 0.43
COCHO43405 AC092183.1-201ENST00000469884 875 ntBASIC17.75■□□□□ 0.43
COCHO43405 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.75■□□□□ 0.43
COCHO43405 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
COCHO43405 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.75■□□□□ 0.43
COCHO43405 MIR4469-201ENST00000583919 79 ntBASIC17.75■□□□□ 0.43
COCHO43405 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.75■□□□□ 0.43
COCHO43405 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.75■□□□□ 0.43
COCHO43405 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 HCG11-201ENST00000411553 5696 ntBASIC17.75■□□□□ 0.43
COCHO43405 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COCHO43405 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COCHO43405 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COCHO43405 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COCHO43405 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COCHO43405 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.74■□□□□ 0.43
COCHO43405 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COCHO43405 HTR7P1-202ENST00000624664 4411 ntBASIC17.74■□□□□ 0.43
COCHO43405 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COCHO43405 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.74■□□□□ 0.43
COCHO43405 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COCHO43405 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
COCHO43405 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COCHO43405 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms