Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.83■□□□□ 0.77
PRPF3O43395 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.83■□□□□ 0.77
PRPF3O43395 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.83■□□□□ 0.77
PRPF3O43395 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
PRPF3O43395 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.83■□□□□ 0.77
PRPF3O43395 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF3O43395 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.83■□□□□ 0.77
PRPF3O43395 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PRPF3O43395 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.83■□□□□ 0.77
PRPF3O43395 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
PRPF3O43395 AL662844.1-201ENST00000546340 181 ntBASIC19.83■□□□□ 0.77
PRPF3O43395 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.83■□□□□ 0.77
PRPF3O43395 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.83■□□□□ 0.77
PRPF3O43395 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.83■□□□□ 0.77
PRPF3O43395 TERC-201ENST00000602385 541 ntBASIC19.83■□□□□ 0.77
PRPF3O43395 AL049840.3-201ENST00000602669 611 ntBASIC19.83■□□□□ 0.77
PRPF3O43395 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRPF3O43395 AL805961.1-202ENST00000641562 540 ntBASIC19.83■□□□□ 0.77
PRPF3O43395 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PRPF3O43395 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
PRPF3O43395 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.83■□□□□ 0.76
PRPF3O43395 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.83■□□□□ 0.76
PRPF3O43395 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.83■□□□□ 0.76
PRPF3O43395 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PRPF3O43395 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF3O43395 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.83■□□□□ 0.76
PRPF3O43395 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.83■□□□□ 0.76
PRPF3O43395 AC243591.1-201ENST00000452967 1364 ntBASIC19.83■□□□□ 0.76
PRPF3O43395 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRPF3O43395 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.82■□□□□ 0.76
PRPF3O43395 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF3O43395 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 AP002414.3-201ENST00000589352 1468 ntBASIC19.82■□□□□ 0.76
PRPF3O43395 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.82■□□□□ 0.76
PRPF3O43395 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 PAWRP1-201ENST00000451083 565 ntBASIC19.82■□□□□ 0.76
PRPF3O43395 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
PRPF3O43395 AC136632.2-201ENST00000512891 861 ntBASIC19.82■□□□□ 0.76
PRPF3O43395 DUX4L17-201ENST00000557360 1267 ntBASIC19.82■□□□□ 0.76
PRPF3O43395 MIR7706-201ENST00000613747 67 ntBASIC19.82■□□□□ 0.76
PRPF3O43395 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PRPF3O43395 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.82■□□□□ 0.76
PRPF3O43395 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF3O43395 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF3O43395 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF3O43395 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 HLA-A-201ENST00000376802 1334 ntBASIC19.81■□□□□ 0.76
PRPF3O43395 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.81■□□□□ 0.76
PRPF3O43395 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PRPF3O43395 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PRPF3O43395 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PRPF3O43395 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PRPF3O43395 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.81■□□□□ 0.76
PRPF3O43395 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.81■□□□□ 0.76
PRPF3O43395 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF3O43395 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.81■□□□□ 0.76
PRPF3O43395 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF3O43395 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms