Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.91■□□□□ 0.46
TRANK1O15050 AL031055.1-201ENST00000606362 631 ntBASIC17.91■□□□□ 0.46
TRANK1O15050 AC004790.1-201ENST00000612686 536 ntBASIC17.91■□□□□ 0.46
TRANK1O15050 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRANK1O15050 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.91■□□□□ 0.46
TRANK1O15050 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRANK1O15050 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
TRANK1O15050 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRANK1O15050 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRANK1O15050 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRANK1O15050 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.9■□□□□ 0.46
TRANK1O15050 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 AC112492.5-201ENST00000421897 457 ntBASIC17.9■□□□□ 0.46
TRANK1O15050 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.9■□□□□ 0.46
TRANK1O15050 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 COX11-210ENST00000639671 696 ntBASIC17.9■□□□□ 0.46
TRANK1O15050 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.9■□□□□ 0.46
TRANK1O15050 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.9■□□□□ 0.46
TRANK1O15050 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.9■□□□□ 0.46
TRANK1O15050 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRANK1O15050 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.9■□□□□ 0.46
TRANK1O15050 BANF1P1-201ENST00000553684 263 ntBASIC17.9■□□□□ 0.46
TRANK1O15050 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.9■□□□□ 0.46
TRANK1O15050 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRANK1O15050 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.9■□□□□ 0.46
TRANK1O15050 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRANK1O15050 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.9■□□□□ 0.46
TRANK1O15050 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TRANK1O15050 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRANK1O15050 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRANK1O15050 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRANK1O15050 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.89■□□□□ 0.46
TRANK1O15050 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRANK1O15050 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRANK1O15050 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 RAB43P1-201ENST00000561790 589 ntBASIC17.89■□□□□ 0.46
TRANK1O15050 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.89■□□□□ 0.46
TRANK1O15050 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.89■□□□□ 0.46
TRANK1O15050 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.89■□□□□ 0.46
TRANK1O15050 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.89■□□□□ 0.45
TRANK1O15050 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRANK1O15050 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRANK1O15050 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.89■□□□□ 0.45
TRANK1O15050 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.89■□□□□ 0.45
TRANK1O15050 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.89■□□□□ 0.45
TRANK1O15050 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRANK1O15050 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRANK1O15050 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 AC007541.1-201ENST00000570282 1469 ntBASIC17.89■□□□□ 0.45
TRANK1O15050 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRANK1O15050 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.88■□□□□ 0.45
TRANK1O15050 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRANK1O15050 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.88■□□□□ 0.45
TRANK1O15050 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.88■□□□□ 0.45
TRANK1O15050 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.88■□□□□ 0.45
TRANK1O15050 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.88■□□□□ 0.45
TRANK1O15050 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRANK1O15050 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRANK1O15050 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms