Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 AC135050.7-201ENST00000624508 2218 ntBASIC19.72■□□□□ 0.75
ATP2A1O14983 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATP2A1O14983 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2A1O14983 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2A1O14983 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
ATP2A1O14983 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
ATP2A1O14983 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2A1O14983 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A1O14983 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.71■□□□□ 0.75
ATP2A1O14983 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A1O14983 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A1O14983 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A1O14983 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A1O14983 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATP2A1O14983 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATP2A1O14983 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATP2A1O14983 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATP2A1O14983 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP2A1O14983 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP2A1O14983 AC107918.2-201ENST00000530817 355 ntBASIC19.7■□□□□ 0.74
ATP2A1O14983 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP2A1O14983 REXO1L3P-201ENST00000622202 1288 ntBASIC19.7■□□□□ 0.74
ATP2A1O14983 AL513210.1-201ENST00000629608 234 ntBASIC19.7■□□□□ 0.74
ATP2A1O14983 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A1O14983 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A1O14983 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A1O14983 AL121761.2-201ENST00000598007 1648 ntBASIC19.69■□□□□ 0.74
ATP2A1O14983 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 AL513480.1-201ENST00000451731 511 ntBASIC19.69■□□□□ 0.74
ATP2A1O14983 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A1O14983 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 AC027612.4-201ENST00000605371 583 ntBASIC19.69■□□□□ 0.74
ATP2A1O14983 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATP2A1O14983 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATP2A1O14983 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A1O14983 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A1O14983 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 AC133963.1-201ENST00000504166 1679 ntBASIC19.68■□□□□ 0.74
ATP2A1O14983 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A1O14983 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATP2A1O14983 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A1O14983 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP2A1O14983 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP2A1O14983 RFPL4AP1-201ENST00000530883 850 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms