Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC27.49■■□□□ 1.99
CHD1O14646 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHD1O14646 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHD1O14646 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
CHD1O14646 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHD1O14646 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHD1O14646 AC023310.3-201ENST00000557027 670 ntBASIC27.48■■□□□ 1.99
CHD1O14646 AC100756.1-201ENST00000562736 682 ntBASIC27.48■■□□□ 1.99
CHD1O14646 AC138749.3-201ENST00000567691 622 ntBASIC27.48■■□□□ 1.99
CHD1O14646 AC116165.1-201ENST00000611806 668 ntBASIC27.48■■□□□ 1.99
CHD1O14646 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC27.48■■□□□ 1.99
CHD1O14646 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHD1O14646 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CHD1O14646 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC27.48■■□□□ 1.99
CHD1O14646 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC27.48■■□□□ 1.99
CHD1O14646 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHD1O14646 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CHD1O14646 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC27.47■■□□□ 1.99
CHD1O14646 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC27.47■■□□□ 1.99
CHD1O14646 AC091167.2-201ENST00000579581 588 ntBASIC27.47■■□□□ 1.99
CHD1O14646 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC27.47■■□□□ 1.99
CHD1O14646 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
CHD1O14646 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC27.47■■□□□ 1.99
CHD1O14646 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC27.47■■□□□ 1.99
CHD1O14646 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC27.47■■□□□ 1.99
CHD1O14646 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC27.47■■□□□ 1.99
CHD1O14646 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHD1O14646 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
CHD1O14646 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 RN7SL618P-201ENST00000477850 296 ntBASIC27.46■■□□□ 1.99
CHD1O14646 RN7SL219P-201ENST00000582872 296 ntBASIC27.46■■□□□ 1.99
CHD1O14646 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC27.46■■□□□ 1.99
CHD1O14646 WFDC1-204ENST00000613603 549 ntBASIC27.46■■□□□ 1.99
CHD1O14646 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC27.46■■□□□ 1.99
CHD1O14646 AL139099.5-201ENST00000635274 300 ntBASIC27.46■■□□□ 1.99
CHD1O14646 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC27.46■■□□□ 1.99
CHD1O14646 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC27.46■■□□□ 1.99
CHD1O14646 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC27.46■■□□□ 1.99
CHD1O14646 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
CHD1O14646 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHD1O14646 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC27.45■■□□□ 1.99
CHD1O14646 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC27.45■■□□□ 1.99
CHD1O14646 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC27.45■■□□□ 1.99
CHD1O14646 AC108725.1-201ENST00000495472 409 ntBASIC27.45■■□□□ 1.99
CHD1O14646 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC27.45■■□□□ 1.99
CHD1O14646 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
CHD1O14646 AC044860.1-202ENST00000559481 777 ntBASIC27.45■■□□□ 1.99
CHD1O14646 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC27.45■■□□□ 1.98
CHD1O14646 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC27.45■■□□□ 1.98
CHD1O14646 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHD1O14646 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC27.44■■□□□ 1.98
CHD1O14646 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC27.44■■□□□ 1.98
CHD1O14646 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.44■■□□□ 1.98
CHD1O14646 AC114501.2-201ENST00000439631 535 ntBASIC27.44■■□□□ 1.98
CHD1O14646 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 RHOQP1-201ENST00000555758 579 ntBASIC27.44■■□□□ 1.98
CHD1O14646 5S_rRNA.22-201ENST00000614916 106 ntBASIC27.44■■□□□ 1.98
CHD1O14646 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC27.44■■□□□ 1.98
CHD1O14646 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC27.44■■□□□ 1.98
CHD1O14646 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 AC092506.1-202ENST00000401022 528 ntBASIC27.44■■□□□ 1.98
CHD1O14646 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC27.44■■□□□ 1.98
CHD1O14646 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC27.44■■□□□ 1.98
CHD1O14646 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC27.44■■□□□ 1.98
CHD1O14646 RPS24-214ENST00000613865 538 ntTSL 5 BASIC27.44■■□□□ 1.98
CHD1O14646 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC27.44■■□□□ 1.98
CHD1O14646 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD1O14646 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHD1O14646 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms