Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC079781.3-201ENST00000449110 356 ntBASIC18.43■□□□□ 0.54
O00370 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
O00370 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.43■□□□□ 0.54
O00370 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.43■□□□□ 0.54
O00370 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.43■□□□□ 0.54
O00370 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.43■□□□□ 0.54
O00370 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.43■□□□□ 0.54
O00370 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.43■□□□□ 0.54
O00370 AL121912.1-201ENST00000603683 238 ntBASIC18.43■□□□□ 0.54
O00370 TP73-AS1-207ENST00000624167 988 ntBASIC18.43■□□□□ 0.54
O00370 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.43■□□□□ 0.54
O00370 AL022326.1-202ENST00000641533 845 ntBASIC18.43■□□□□ 0.54
O00370 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.43■□□□□ 0.54
O00370 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
O00370 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
O00370 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.42■□□□□ 0.54
O00370 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.42■□□□□ 0.54
O00370 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
O00370 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
O00370 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 AC116353.5-201ENST00000638148 1699 ntBASIC18.42■□□□□ 0.54
O00370 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 AC004870.1-201ENST00000315132 882 ntBASIC18.42■□□□□ 0.54
O00370 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.42■□□□□ 0.54
O00370 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.42■□□□□ 0.54
O00370 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.42■□□□□ 0.54
O00370 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.42■□□□□ 0.54
O00370 FAAHP1-202ENST00000446499 1238 ntBASIC18.42■□□□□ 0.54
O00370 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
O00370 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
O00370 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.42■□□□□ 0.54
O00370 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
O00370 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.42■□□□□ 0.54
O00370 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
O00370 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.42■□□□□ 0.54
O00370 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.42■□□□□ 0.54
O00370 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
O00370 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.41■□□□□ 0.54
O00370 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
O00370 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.41■□□□□ 0.54
O00370 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.41■□□□□ 0.54
O00370 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
O00370 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.41■□□□□ 0.54
O00370 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
O00370 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.41■□□□□ 0.54
O00370 SCARNA2-201ENST00000458748 420 ntBASIC18.41■□□□□ 0.54
O00370 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.41■□□□□ 0.54
O00370 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.41■□□□□ 0.54
O00370 AL031008.1-201ENST00000619963 541 ntBASIC18.41■□□□□ 0.54
O00370 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.41■□□□□ 0.54
O00370 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.41■□□□□ 0.54
O00370 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
O00370 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.41■□□□□ 0.54
O00370 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
O00370 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
O00370 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
O00370 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 395.6 ms