Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARVCFO00192 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARVCFO00192 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARVCFO00192 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARVCFO00192 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ARVCFO00192 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARVCFO00192 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARVCFO00192 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARVCFO00192 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.78■□□□□ 0.6
ARVCFO00192 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARVCFO00192 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 WASH6P-202ENST00000359512 1437 ntBASIC18.78■□□□□ 0.6
ARVCFO00192 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.78■□□□□ 0.6
ARVCFO00192 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.78■□□□□ 0.6
ARVCFO00192 ALG1L8P-201ENST00000533887 760 ntBASIC18.78■□□□□ 0.6
ARVCFO00192 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.78■□□□□ 0.6
ARVCFO00192 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ARVCFO00192 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ARVCFO00192 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARVCFO00192 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ARVCFO00192 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.77■□□□□ 0.6
ARVCFO00192 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.77■□□□□ 0.6
ARVCFO00192 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.77■□□□□ 0.6
ARVCFO00192 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.77■□□□□ 0.6
ARVCFO00192 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.77■□□□□ 0.6
ARVCFO00192 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARVCFO00192 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.77■□□□□ 0.6
ARVCFO00192 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARVCFO00192 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARVCFO00192 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ARVCFO00192 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARVCFO00192 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARVCFO00192 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.77■□□□□ 0.59
ARVCFO00192 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.76■□□□□ 0.59
ARVCFO00192 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.76■□□□□ 0.59
ARVCFO00192 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.76■□□□□ 0.59
ARVCFO00192 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.76■□□□□ 0.59
ARVCFO00192 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ARVCFO00192 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.76■□□□□ 0.59
ARVCFO00192 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.76■□□□□ 0.59
ARVCFO00192 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.76■□□□□ 0.59
ARVCFO00192 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.76■□□□□ 0.59
ARVCFO00192 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 AP005018.1-201ENST00000525475 301 ntBASIC18.76■□□□□ 0.59
ARVCFO00192 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.76■□□□□ 0.59
ARVCFO00192 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.76■□□□□ 0.59
ARVCFO00192 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.76■□□□□ 0.59
ARVCFO00192 AC008267.7-201ENST00000624570 1194 ntBASIC18.76■□□□□ 0.59
ARVCFO00192 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.76■□□□□ 0.59
ARVCFO00192 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
ARVCFO00192 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARVCFO00192 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.75■□□□□ 0.59
ARVCFO00192 GNAS-203ENST00000306120 1878 ntBASIC18.75■□□□□ 0.59
ARVCFO00192 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARVCFO00192 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms